Species: Trigonella foenum-graecum
Accession Number
SRP101694
Sample
Sample Location: the Botanic Garden in Bonn(Accession No. 19271)
Sample Part: leaf and stem (treated with methyl jasmonate, cholesterol and squalene)
Sequencing
Sequencing platform: Illumina MiSeq
Sequencing data: 5,280,759; 5,257,733; 7,071,925 and 1,350,737 cleaning reads were selected for KMeJ, KCHL, KSQ, and KK, respectively.
Assembly and Annotation
Assembly software: Trinity
Assembly result: 194,490 contigs were generated and 112,850 unigenes, average length of 386.43 bp.
Annotation Method: NR, UniRef90, Pfam, GO, KOG, KEGG
Data Url
Reference
Ciura J , Szeliga M , Grzesik M , et al. Changes in fenugreek transcriptome induced by methyl jasmonate and steroid precursors revealed by RNA-Seq[J]. Genomics, 2018, 110(4):267-276.
