Species: Carthamus tinctorius
Accession Number
SRR6123574-SRR6123576
Sample
Sample Location: at the medicinal botanical garden, Wenjiang campus, Chengdu University of Traditional Chinese Medicine.
Sample Part: roots, stems, leaves, seeds, and petals
Sequencing
Sequencing platform: PacBio RS II
Sequencing data: 4,548,120 subreads (10.43Gb of clean data)
Assembly and Annotation
Assembly software: SMRT Analysis, GMAP, CD-HIT
Assembly result: 79,926 isoforms and 38,302 de-redundant sequences.
Annotation Method: COG, GO, KEGG, KOG, Pfam, Swissprot, NR
Data Url
Reference
Jiang C , Xiaohui T , Chaoxiang R , et al. Full-length transcriptome sequences and the identification of putative genes for flavonoid biosynthesis in safflower[J]. BMC Genomics, 2018, 19(1):548.
