Species: Lithospermum officinale

Accession Number

GSE111375

Sample

Sample Location: in the natural environment of Chiba University,Japan (located at 35°36′17.7″ N; 140°08′06.9″ E)

Sample Part: leaf, stem, and root

Sequencing

Sequencing platform: Illumina Hi-Seq 2000

Sequencing data: 4 Gb raw reads

Assembly and Annotation

Assembly software: Trinity, CLC Genomics Workbench, SOAP

Assembly result: 77,047 unigenes with minimum and maximum sequence length as 196 bp and 12,400 bp, respectively, with an impressive N50 value as 1,524 bp.

Annotation Method: Nr, GO, KEGG, Uniprot, InterPro

Reference

Amit R , Taiki N , Yohei S , et al. De Novo Transcriptome Assembly and Characterization of Lithospermum officinale to Discover Putative Genes Involved in Specialized Metabolites Biosynthesis[J]. Planta Medica, 2018:a-0630-5925-.

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