Species: Dioscorea zingiberensis

Accession Number

SRR6281649-SRR6281651

Sample

Sample Location: Wuhan Botanical Garden of Chinese Academy of Science of Zhuxi County , Hubei province of China

Sample Part: leaf, rhizome

Sequencing

Sequencing platform: Illumina Hiseq 2000

Sequencing data: 55,798,190 raw reads of Aug_L; 45,367,360 raw reads of Aug_R; 42,564,054 raw reads of Nov_R.

Assembly and Annotation

Assembly software: Trinity

Assembly result: 176,406 transcripts(143,245 unigenes) were assembled with a mean length of 715 bp in a range of 201 to 16,773 bp.

Annotation Method: NR, Nt, KOG, COG, Swiss-Prot, KO, Pfam, GO

Data Url

https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-run-1/SRR6281651/SRR6281651.1 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-run-1/SRR6281650/SRR6281650.1 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-run-1/SRR6281649/SRR6281649.1

Reference

Li Jia,Liang Qin,Li Changfu,et al. Comparative Transcriptome Analysis Identifies Putative Genes Involved in Dioscin Biosynthesis in Dioscorea zingiberensis.[J]. Molecules (Basel, Switzerland),2018,23(2).

Reference url

https://www.mdpi.com/1420-3049/23/2/454/htm

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