Species: Curcuma wenyujin
Sample
Sample Location: Samples of the traditionally cultivated (Wenzhou) C. wenyujin (WZ) were purchased from Taoshan Town, Ruian, Wenzhou, Zhejiang Province, on December 5, 2017, whereas those of the introduced (Haikou) C. wenyujin (HK) were obtained on the same date from cultivation fields at the Haikou branch of the Institute of Medicinal Plants.
Sample Part: rhizomes
Sequencing
Sequencing platform: Illumina
Sequencing data: 140,767,350 clean reads, 41,744,063,186 clean bases
Assembly and Annotation
Assembly software: Trinity
Assembly result: 185,006 transcripts, with N50 values of 1,796 bp. 99,942 unigenes, with N50 values of 1,406 bp.
Annotation Method: COG, KOG, eggNOG, Swiss-Prot, GO, KEGG
Reference
Lu L, Liu P, Yang Y, Zhang Y, Wang C, Feng J, et al. (2020) Transcriptome analysis of Curcuma wenyujin from Haikou and Wenzhou, and a comparison of the main constituents and related genes of Rhizoma Curcumae. PLoS ONE 15(11): e0242776.
Reference url