Species: Stevia rebaudiana
Accession Number
SRP198734
Sample
Sample Location: at Department of Genetics and Plant Breeding, C.C. S. Haryana Agricultural University, Hisar, (Haryana), India
Sample Part: SBG_V (background genotype at vegetative phase), SBG_F (background genotype at reproductive phase) and their corresponding samples from mutant genotypes (mutant genotype at vegetative phase i.e. SMG_V and mutant genotype at prolonged vegetative phase i.e. SMG_PV)
Sequencing
Sequencing platform: Illumina GAIIx
Sequencing data: 97,929,146 raw reads, 91,298,216 high quality filtered reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 60,322 contigs, 55,902 non-redundant transcripts, with an average length of 992.68 bp and N50 length of 1,356 bp.
Annotation Method: GO, KEGG, eggNOG
Data Url
Reference
Singh G, Pal P, Masand M, et al. Comparative transcriptome analysis revealed gamma-irradiation mediated disruption of floral integrator gene (s) leading to prolonged vegetative phase in Stevia rebaudiana Bertoni[J]. Plant Physiology and Biochemistry, 2020, 148: 90-102.
