Species: Dendrobium officinale
Accession Number
PRJNA561268
Sample
Sample Location: cultivated in State Dendrobium biological industry base at Yandang (28.37°N, 121.03°E; Zhejiang Province, China)
Sample Part: roots
Sequencing
Sequencing platform: Illumina Hiseq 2500
Sequencing data: 55.3 million clean reads (8.18 Gb clean data)
Assembly and Annotation
Assembly software: Tophat
Assembly result: 317.3 million (approximately 60.98–67.86%) clean reads were mapped to the D. officinale reference genome.37,479 unigenes was annotated.
Annotation Method: NR, KO, COG, GO, Nt, KEGG, Pfam, Swiss-Prot
Reference
Jiang W, Wu Z, Wang T, et al. Physiological and transcriptomic analyses of cadmium stress response in Dendrobium officinale seedling[J]. Plant Physiology and Biochemistry, 2020, 148: 152-165.