Description
Toona sinensis (A. Juss) Roem (2n = 2x = 56), also known as Chinese mahogany or Xiang Chun (in Chinese), is an edible woody plant. The species belongs to the Meliaceae family nd is widely distributed across central China and southeastern Asia. T. sinensis has also been widely used in traditional Chinese medicine. It is known as an herbal medicine with anti-inflammatory, astringent and carminative effects for the treatment of urinary tract infections, enteritis, dysentery, leukorrheal diseases and itchy skin. Recently, extracts of T. sinensis leaves and bark that primarily include terpenoids, phenylpropanoids and flavonoids, have been identified to be biologically active, with anti-tumor, hypoglycemic, antioxidant, anti-inflammatory, hepatoprotective, antiviral and antibacterial effects.
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Published journals
Molecular Ecology Resources
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Publish date
2021.01
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Sequence Method
Illumina HiSeq, Nanopore, Hi-C
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Assembly Method
CANU v. 1.8, SMARTdenovo v1.0, Racon v1.3.3, Medaka v0.7.1, Pilon v1.23, bowtie2-2.3.5, HiC-Pro version 2.8.0_devel, Juicer v1.5, 3D de novo assembly (3D-DNA) v180922
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Genome Size
596.35 Mb
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Genome Coverage
333x
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Contigs
789
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N50
1525641
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Bioproject
CNP0000958
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Data
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Reference url
https://onlinelibrary.wiley.com/doi/abs/10.1111/1755-0998.13318
Reference
Ji, Y.‐T., Xiu, Z., Chen, C.‐H., Wang, Y., Yang, J.‐X., Sui, J.‐J., Jiang, S.‐J., Wang, P., Yue, S.‐Y., Zhang, Q.‐Q., Jin, J.‐l., Wang, G.‐S., Wei, Q.‐Q., Wei, B., Wang, J., Zhang, H.‐L., Zhang, Q.‐Y., Liu, J., Liu, C.‐J., Jian, J.‐B. and Qu, C.‐Q. (2021), Long read sequencing of Toona sinensis (A. Juss) Roem: a chromosome‐level reference genome for the Meliaceae family. Molecular Ecology Resources. Accepted Author Manuscript.